PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han007251
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family ERF
Protein Properties Length: 208aa    MW: 22968.2 Da    PI: 4.7075
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-169a-Helianthus_annuus-23416PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.8e-202373155
        AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               ++y+GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g
  Han007251 23 PRYRGVRKRP-WGRFAAEIRDpWK----KARVWLGTFDSAEDAARAYDAAARALRG 73
               68********.**********883....5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.7E-132373IPR001471AP2/ERF domain
CDDcd000185.27E-202383No hitNo description
SMARTSM003801.1E-372487IPR001471AP2/ERF domain
PROSITE profilePS5103223.6962481IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-222482IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.0E-322481IPR001471AP2/ERF domain
PRINTSPR003671.2E-102536IPR001471AP2/ERF domain
PRINTSPR003671.2E-104763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
XRTPKTAAGE PIGARPEDNT TEPRYRGVRK RPWGRFAAEI RDPWKKARVW LGTFDSAEDA  60
ARAYDAAARA LRGSKAKTNF PILPSEKVEN FDDVMKPRPT VSSLSSTVES KSGNRSNLIN  120
PVQRLNLNPV QTDVMNDDDD CHSGCDSSSS VVDDYYCDVD LTSSVLVRKP LPFDLNLPPP  180
PPPSDEFGFC SNDNGNDNDE LYVTALCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-232582361ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Han.16200.0bud
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010943239.19e-44PREDICTED: ethylene-responsive transcription factor 3-like
RefseqXP_010943238.19e-44PREDICTED: ethylene-responsive transcription factor 3-like
TrEMBLA0A124SC958e-61A0A124SC95_CYNCS; AP2/ERF domain-containing protein
STRINGPGSC0003DMT4000373594e-42(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-21ethylene responsive element binding factor 3